Gut and Liver is an international journal of gastroenterology, focusing on the gastrointestinal tract, liver, biliary tree, pancreas, motility, and neurogastroenterology. Gut atnd Liver delivers up-to-date, authoritative papers on both clinical and research-based topics in gastroenterology. The Journal publishes original articles, case reports, brief communications, letters to the editor and invited review articles in the field of gastroenterology. The Journal is operated by internationally renowned editorial boards and designed to provide a global opportunity to promote academic developments in the field of gastroenterology and hepatology. +MORE
Yong Chan Lee |
Professor of Medicine Director, Gastrointestinal Research Laboratory Veterans Affairs Medical Center, Univ. California San Francisco San Francisco, USA |
Jong Pil Im | Seoul National University College of Medicine, Seoul, Korea |
Robert S. Bresalier | University of Texas M. D. Anderson Cancer Center, Houston, USA |
Steven H. Itzkowitz | Mount Sinai Medical Center, NY, USA |
All papers submitted to Gut and Liver are reviewed by the editorial team before being sent out for an external peer review to rule out papers that have low priority, insufficient originality, scientific flaws, or the absence of a message of importance to the readers of the Journal. A decision about these papers will usually be made within two or three weeks.
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Fumin Xu1 , Chunmei Yang1
, Mingcheng Tang1
, Ming Wang1
, Zhenhao Cheng1
, Dongfeng Chen1
, Xiao Chen2
, Kaijun Liu1
Correspondence to: Kaijun Liu
ORCID https://orcid.org/0000-0003-0027-9278
E-mail kliu_tmmu@126.com
Xiao Chen
ORCID https://orcid.org/0000-0002-8647-0614
E-mail xiaochen229@foxmail.com
Fumin Xu and Chunmei Yang contributed equally to this work as first authors.
This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
Gut Liver 2022;16(5):686-696. https://doi.org/10.5009/gnl210362
Published online December 16, 2021, Published date September 15, 2022
Copyright © Gut and Liver.
Pancreatitis is one of the most common inflammatory diseases of the pancreas caused by autodigestion induced by excessive premature protease activation. However, recognition of novel pathophysiological mechanisms remains a still challenge. Both genetic and environmental factors contribute to the pathogenesis of pancreatitis, and the gut microbiota is a potential source of an environmental effect. In recent years, several new frontiers in gut microbiota and genetic risk assessment research have emerged and improved the understanding of the disease. These investigations showed that the disease progression of pancreatitis could be regulated by the gut microbiome, either through a translocation influence or in a host immune response manner. Meanwhile, the onset of the disease is also associated with the heritage of a pathogenic mutation, and the disease progression could be modified by genetic risk factors. In this review, we focused on the recent advances in the role of gut microbiota in the pathogenesis of pancreatitis, and the genetic susceptibility in pancreatitis.
Keywords: Pancreatitis, Gut microbiota, Genetic susceptibility, Pathogenesis
Pancreatitis, one of the most common gastrointestinal diseases, is the main cause for hospital admission, and the incidence of pancreatitis is increasing worldwide, which is associated with the elevated socioeconomic burden.1 The annual incidence of acute pancreatitis (AP) is approximately 34 per 100,000 in developed countries and it keeps a continuous growth worldwide.2 AP is usually caused by structural obstruction of the biliary tract, alcohol consumption, endoscopic retrograde cholangiopancreatography and drugs, which ultimately lead to acinar cell death, inducing local and systemic inflammation.3-5 Chronic pancreatitis (CP) often occurs in patients with recurrent pancreatic injury or prolonged AP. Despite many advances have been made in respects of the pathophysiology of pancreatitis, there are still no medication available to treat or prevent AP at present.6 Additionally, in many cases, individuals who even have attacks of alcoholism and gallstones do not suffer from AP.7,8 This inclined us to further explore the underlying mechanism of pancreatitis.
The pathogenesis of disease is generally related with genetic and environmental factors, while human gut microbiome is recognized as a potential source of environmental effect on illness.9 Recent studies regarding the role of gut microbiome in the pathophysiology of the pancreas are increasing, during which immune regulation and interplay between host microbiomes and the pancreas attract much attention.10-14 These studies have initiated new insight into pancreatic diseases from the perspective of the gastrointestinal microbiota. On the other hand, it has long been suspected that genetic susceptibility factors conduce to the pathogenesis of the disease, since only a small proportion of alcoholics finally develop CP.15 Various groups of genetic mutations, such as the serine peptidase inhibitor Kazal type 1 (SPINK1), anionic trypsinogen serine protease 2 (PRSS2), cationic trypsinogen serine protease 1 (PRSS1), cystic fibrosis transmembrane conductance regulator (CFTR) genes and so on, were observed in various types of pancreatitis.16,17 These specific genetic mutations instruct us to uncover the underlying mechanism of pancreatitis on a genetic and cellular level.
In this review, we summarize recent advances in research of gut microbiota and genetics related to pancreatitis, and analyze the role of the gut microbiota and genetic susceptibility in the pathogenesis of pancreatitis. Additionally, we discuss the relationship between gut microbiota and genetic susceptibility in patients with pancreatitis and are attempting to speculate the pathogenesis of pancreatitis from a novel perspective.
During the course of AP, microcirculatory injury and hypovolemia would emerge,18 which could cause intestinal mucosal ischemia and subsequent reperfusion injury, leading to dysfunction of intestinal barrier and gut microbiota translocation. Current investigations have shown heterogeneity in intestinal microbial composition between pancreatitis patients and healthy controls. Zhang
Table 1. Studies about Alterations in Microbiome Composition Involving Pancreatitis Patients
Disease | Author (year) | Study type | Disease states vs control | Sample type | Microbial evaluation | Microbial alterations |
---|---|---|---|---|---|---|
AP | Zhang | Controlled | AP vs healthy participants | Fecal | 16S rRNA gene sequencing | AP: |
↑Bacteroidetes and Proteobacteria | ||||||
↓Firmicutes and Actinobacteria | ||||||
Li | Controlled | MAP vs SAP | Blood | 16S rDNA gene sequencing | SAP: | |
↑ | ||||||
Yu | Controlled | MAP vs MSAP vs SAP | Fecal | 16S rRNA gene sequencing | MAP: | |
↑Finegoldia ↓Blautia | ||||||
MSAP: | ||||||
↑Anaerococcus ↓ | ||||||
SAP: | ||||||
↑Enterococcus ↓ | ||||||
Hu | Controlled | HTGAP vs AP by other causes | Fecal | 16S rRNA gene sequencing | HTGAP: | |
↑Escherichia/Shigella and Enterococcus | ||||||
↓ | ||||||
CP | Jandhyala | Controlled | CP vs healthy participants | Fecal | 16S rRNA gene sequencing | CP: |
↑ Firmicutes | ||||||
↓ Bacteroidetes | ||||||
Gorovits | Observational | CP vs healthy people from literature reference ranges | Fecal | Bacteriological and gas-liquid chromatography analysis | CP: | |
↑Bifidobacterium and Lactobacillus | ||||||
↓Enterobacter, Proteus, Kleibsella, and Morganella | ||||||
Savitskaia | Observational | CP vs healthy people from literature reference ranges | Fecal | Bacteriological analysis | CP: | |
↑ | ||||||
↓Lactobacillus | ||||||
Hamada | Controlled | CP vs AIP | Fecal | 16S rRNA gene sequencing | CP: | |
↑Bacteroides, Streptococcus, and Clostridium |
AP, acute pancreatitis; CP, chronic pancreatitis; MAP, moderate acute pancreatitis; SAP, severe acute pancreatitis; MSAP, moderate severe acute pancreatitis; HTGAP, hypertriglyceridemia-associated acute pancreatitis; AIP, autoimmune pancreatitis; 16S rRNA, 16S ribosomal ribonucleic acid.
When it comes to the evaluation of severity and prognosis of AP, the imbalance of bacterial composition and altered gut microbiota diversity are two overlooked factors and have been gradually emphasized by researchers in recent years. Yu
Though the efficacy of probiotics, such as
CP with its damaged pancreatic acinar cells, can result in pancreatic exocrine insufficiency and small intestinal bacteria overgrowth. Small intestinal bacteria overgrowth appears to be more likely to occur in CP patients, due to intestinal dysmotility and reduced alkalization of intestinal fluid, as well as reduced pancreas-derived antimicrobial peptide.30 In a meta-analysis performed by Memba
Autoimmune pancreatitis (AIP), a unique form of CP, characterizes by storiform fibrosis and periductal lymphoplasmacytic infiltrate with or without granulocyte epithelial lesions, and depending on which to be divided into two types.37 The most important feature of AIP (solely for type 1) is the elevation of serum immunoglobulin G4. One study found that
It is well-known that gut microbiota takes part in human physiological activities via influences on regulation of the mucosal immune system and intestinal architecture, involvement of digestion and metabolism.39 It is still controversial whether microorganisms inhabit normal pancreas.10,11 But it is a great chance that translocation of intestinal flora would occur, since the pancreas is linked to the gastrointestinal tract anatomically via the pancreatic duct and the route of mesenteric venous and lymphatic drainage (Fig. 1). Gut microbiota is confined to gastrointestinal tract in physiological conditions due to gastrointestinal mucosal barriers, including mechanical barrier, immune barrier, and biological barrier, which can effectively prevent the intestinal pathogenic bacteria and toxins to reach outside the gut. Once this homeostasis is disrupted, intestinal opportunistic pathogens can enter the blood circulation of AP patients through the damaged intestinal barrier, thus aggravating the progression of disease and the occurrence of infectious complications. In a meta-analysis of 18 studies, approximately 59% of patients with pancreatitis had intestinal barrier imbalance.40 Inflammation is the main pathophysiological response in pancreatitis, which is driven by either an infectious or a sterile event. Though bacteria are not the directly cause of pancreatitis, the microorganisms can enter the pancreas in the inflammatory environment and aggravate the local and systemic inflammation. This is consistent with theories that the gut is the origin of clinical sepsis.42,43
In recent years, the role of immune cells in the pathogenesis of pancreatitis has been paid much attention, and further understanding of immune signaling pathway have been utilized to identify new therapeutic targets that may alter disease progression.44,45 The relationship between gut microbiota and host immune system is intimate and complex. Host-microbiota communication is mainly based on one group of host receptors, the pattern recognition receptors (PRRs) of the innate immune system, such as Toll-like receptors, C-type lectin receptors, and nucleotide-binding oligomerization domain (NOD)-like receptors.46-48 In pancreatic acinar cells, inflammation and immune response can be triggered by sensing of microorganism antigens by PRRs, which is involved in the pathogenesis of pancreatitis.39 In animal models, pancreatitis in mice model could be induced by chronic low-dose cerulein (cholecystokinin receptor agonist) stimulation collaborating with NOD1 agonist stimulation, while this effect is prevented in NOD1 knockout mice.49 One study indicated that gut microbiota could trigger non-infectious pancreatic inflammation through NOD1 signaling pathway in pancreatic acinar cells by binding to a peptide derived from peptidoglycan.50
Antimicrobial peptides (AMPs) are secretory components in the gastrointestinal tract. Though most proteins in pancreatic juice are contributed by digestive enzymes, the AMPs secreted by pancreatic acinar cells are also very important component of pancreatic juice.51,52 Pancreatic AMPs have a prominent role in regulating the gut microbiota that is essential for gut innate immunity. There is an intimate bidirectional communication between pancreatic AMPs and gut microbiota. On one hand, the lower gut flora could influence the production of pancreatic AMP to produce an immunoregulatory pancreatic environment by decreasing pro-inflammatory immune cells through short-chain fatty acids which are anti-inflammatory metabolites produced by intestinal microbiome, also facilitate integrity of intestinal epithelium.12 On the other hand, lack of AMP by the pancreas disrupts the gut microbiome homeostasis and leads to intestinal bacteria overgrowth and development of a pro-inflammatory status (Fig. 1). Additionally, the secretion of cathelicidin-related antimicrobial peptide (CRAMP) decreases when the Ca2+ channel Orai1 is knocked out in pancreatic acinar cells (Orai1−/−) of adult mice, and resulted in systemic infection and high mortality rate due to intestinal bacterial overgrowth, elevated intestinal permeability and bacterial translocation.13
Hereditary pancreatitis (HP) is defined as the condition in a family with two or more members suffered from recurrent acute pancreatitis (RAP) or CP in two or more generations, or perhaps pancreatitis which is associated with the pathogenic mutation of the cationic trypsinogen PRSS1 gene.53 This gain-of-function mutation of the cationic trypsinogen gene was first discovered by Whitcomb
Recent HP-related investigations have shown the mechanism and process of a primary susceptibility factor, such as PRSS1 R122H, turn into risk factors for AP and CP via RAP.58-60 These findings confirmed the trypsin dependent theory in which gain-of-function mutations brought about trypsinogen or trypsin to be resistant to degradation. Besides, the activation of premature trypsin might take an alternate path resulting in RAP, thereafter part of the patients subsequently develop to CP. There are some known genetic contributors to familial pancreatitis including loss-of-function mutations of genes which encode the SPINK1, CFTR and variants in other genes.61-65 Whitcomb66 have shown that the gene-environment interactions regarding HP are very complex by using a genome-wide association study analysis performed by next-generation sequencing.
The well-known mechanism of pancreatitis is trypsin premature activation, causing extensive zymogen activation, followed by pancreatic self-digestion, excessive immune response, and subsequent effects.67 Making use of candidate gene approaches, alterations in several distinct genes are associated with the regulation of trypsin in the pancreas, which is correlated with the pathogenesis of pancreatitis. To better understand the role of genetics in pancreatitis, we should firstly focus on the normal pancreas exocrine function, activity and regulation of trypsinogen, a zymogen precursor to trypsin. Trypsin is a protease produced and secreted by pancreatic acinar cells and upstream duct cells and activates other zymogens in the duodenum under a physiological state. Premature activation of trypsin could trigger an excessive, uncontrolled inflammatory response in pancreas, as seen in AP.68 The two most common forms in pancreatic trypsinogen are the cationic (PRSS1) and anionic (PRSS2) forms. In the physiologic condition, autolysis could prevent from premature or excessive trypsin activation in pancreatic acinar and ductal cells. However pathogenic PRSS1 mutations can induce trypsin prematurely activated or degradation-resistant and meanwhile upgrades the level of autoactivation of mutant trypsinogens and trypsin activity within pancreas.8,63,69 As for PRSS2, pathogenic PRSS2 variants were not identified in HP or sporadic CP, whereas a variant in the noncoding region of the
During the inflammatory response of the pancreas, SPINK1 is significantly elevated to prevent excessive activation of trypsinogen and pancreatic damage through feedback inhibition of trypsin. This is the first line of defense against premature activation of intracellular trypsin. The most common p.N34S SPINK1 mutation was first mentioned to be correlated with CP in 2000.71 Although the underlying mechanism of CP remains mystery, a meta-analysis has discovered that the SPINK1 N34S variant could increase the risk of alcoholic, idiopathic, and tropical CP.72 Moreover, it seems to be essential for patients with heterozygous SPINK1 mutations to be linked to RAP or CP in collaborate with additional contributing factors related to recurrent activation of trypsin (like PRSS1 or CFTR).73-75 This suggests that heterozygous SPINK1 mutations could not increase susceptibility of pancreatitis directly, but aggravate recurrent pancreatic injury correlated to the activation of trypsin and promote the progression of CP.
CFTR, an AMP-regulated anion channel located in epithelial cell membranes, mediates the secretion of bicarbonate-rich juice which is vital for secreting pancreatic zymogens. The dysfunction of the
Although the pathogenic role of PRSS1, SPINK1, and CFTR variants in pancreatitis is more widely known, a few uncommon genes also contribute to this process. These genes include calcium-sensing receptor (CASR), chymotrypsin C (CTRC), carboxypeptidase A1 (CPA1), and claudin-2 (CLDN2) gene, which are considered disease modifiers rather than disease initiators (Table 2, Fig. 2).79
Table 2. Genetic Susceptibility Factors in Pancreatitis
Genetic risk factors in pancreatitis | First discovered concerned with pancreatitis | Most common pathogenic variant | Mechanism of action | Role in the disease | Phenotype in pancreatitis |
---|---|---|---|---|---|
PRSS1 | Whitcomb | PRSS1 (R122H, N29I, A16V) | Prematurely activated or degradation-resistant | Disease initiator | Hereditary pancreatitis |
Trypsin in acinar cells | |||||
SPINK1 | Witt | SPINK1 (N34S) | Decrease levels of trypsin inhibitor in acinar cells | Disease modifier | Familial pancreatitis |
CFTR | Kerem | CFTR (F508del) | Fail to alkalinize acinar cells, result in retention of zymogens in the duct, and cause ductal obstruction and epithelial damage | - | Hereditary pancreatitis |
Idiopathic pancreatitis | |||||
Recurrent acute pancreatitis | |||||
CTRC | Rosendahl | CTRC (G60G) | Disrupt trypsin inactivation and protective function of CTRC-mediated trypsinogen degradation | Disease modifier | Recurrent acute pancreatitis |
Chronic pancreatitis | |||||
CASR | Felderbauer | CASR (R990G) | Lost control of pancreatic juice calcium concentration and increases risk of trypsinogen activation and stabilization of trypsin | Disease modifier | Chronic pancreatitis |
Multigenic variants: | - | - | - | - | Recurrent acute pancreatitis |
CFTR/SPINK1; CTRC/SPINK1; CASR/SPINK1 | Chronic pancreatitis |
PRSS1, serine protease 1; SPINK1, serine peptidase inhibitor Kazal type 1; CFTR, cystic fibrosis transmembrane conductance regulator; CTRC, chymotrypsin C; CASR, calcium-sensing receptor.
Although genetic etiology accounts for around 25% of all cases of CP, it should be highlighted that about 40% of cases are thought to be idiopathic.80 The most common etiology of pancreatitis is still biliary disease, hypertriglyceridemia (HTG) and alcoholism.81 There have not been observed that genetic factors are involved in bile duct obstruction, pancreatic divisum, or the dysfunction of Oddi sphincter. The emergence of alcohol-related CP is often clustered in families, and this would further indicate a genetic predisposition.82 Epidemiological studies have unexpectedly found that only a small ratio of heavy drinkers (less than 3%) would develop CP, but the risk of alcoholic pancreatitis is low when smoking is adjusted in regression analysis.7,83 Moreover, a threshold of more than five drinks a day (1 drink=4 g of alcohol) or 35 drinks a week must be achieved before the risk of pancreatitis significantly increase.84 These observations suggest that alcohol consumption is stronger modifier factor than a susceptibility factor, especially with smoking83 and CLDN risk variants.66 The CLDN2 gene, encoding claudin-2, is expressed at low levels in pancreatic ducts as a tight junction protein. This high-risk gene variant triggers alcohol-related CP in men whose probability are greater compared with women with a high-risk locus near CLDN2 on the X chromosome correlated to pancreatitis.66,85,86 Further mechanisms of action of this risk locus need to be clarified.
Like alcohol-induced CP, only a small ratio of patients with HTG develop pancreatitis, which has inclined us to investigate genetic susceptibility factors.87 HTG-induced pancreatitis attacks typically from one or more secondary causes, such as medications, diabetes, alcoholism, pregnancy, in patients with potentially common genetic abnormalities of lipoprotein metabolism. Common variants in genes such as APOA5 (encoding apo A5), GCKR (encoding glucokinase regulatory protein), LPL (encoding lipoprotein lipase) and APOB (encoding apo B), associated with lipoprotein metabolism, can lead to a rise in serum triglyceridemia to the extent of incurring pancreatitis.88 A detailed process of triglyceridemia metabolism can refer to elsewhere (see review).89 Focused on genetic factors to HTG pancreatitis, Chang
The causation between microbiota and host genetics remains to be elucidated, since our knowledge of the host side is limited and recognition of which bacterial genes are implementing the crosstalk with the host is poorer.95 What we have already known is that the gut microbiota diversity, structure, and composition are associated with host genetic variations.96,97 These associations are specifically motivated by host genetic variation in immunity-related pathways.98 Meanwhile, one report demonstrates that genetic risk for developing type 1 diabetes autoimmunity is linked with significant changes in the gut microbiota,99 which is a manifestation of interaction between gut microbiota and host genetic factors in pancreas disorders. As for pancreatitis, another study reported that children with CP who carry different genetic variations concerned with abnormal activation of trypsinogen and secretions in the pancreatic duct present different abundances of gut microbiota genera.100 Their findings support that disordered gut microbiota may affect host gene expression and then disturbing normal physiology function and contributing to the development of disease. On basis of above evidence, we can raise the hypothesis that the pathogenesis of pancreatitis might be influenced by the interactions of both genetic and microbial factors. However, the in-depth mechanism needs to be further investigated.
Growing evidence regarding the role of gut microbiota and genetic variations in pathophysiologic mechanism of pancreatitis has provided us with new insights into AP and CP. We now know that pancreatitis is not only a dysfunction of acinar cells, but a multi-factorial complicated pancreatic disorder involving gut microbiota, host immune system, environmental factors, and genetic causes. Although mechanistic understanding of these two rare factors is limited, it is clear that continued advances in bacteria-related function and genomic technologies would act as novel therapeutic interventions for pancreatitis in the near future.
This work was supported by the National Natural Science Foundation of China (number: 81700483), Chongqing Research Program of Basic Research and Frontier Technology (numbers: cstc2017jcyjAX0302, cstc2020jcyj-msxmX1100), Frontier Technology Research Program of Army Medical University (number: 2019XLC3051).
No potential conflict of interest relevant to this article was reported.
Gut and Liver 2022; 16(5): 686-696
Published online September 15, 2022 https://doi.org/10.5009/gnl210362
Copyright © Gut and Liver.
Fumin Xu1 , Chunmei Yang1
, Mingcheng Tang1
, Ming Wang1
, Zhenhao Cheng1
, Dongfeng Chen1
, Xiao Chen2
, Kaijun Liu1
Departments of 1Gastroenterology and 2Nuclear Medicine, Daping Hospital, Army Medical University, Chongqing, China
Correspondence to:Kaijun Liu
ORCID https://orcid.org/0000-0003-0027-9278
E-mail kliu_tmmu@126.com
Xiao Chen
ORCID https://orcid.org/0000-0002-8647-0614
E-mail xiaochen229@foxmail.com
Fumin Xu and Chunmei Yang contributed equally to this work as first authors.
This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
Pancreatitis is one of the most common inflammatory diseases of the pancreas caused by autodigestion induced by excessive premature protease activation. However, recognition of novel pathophysiological mechanisms remains a still challenge. Both genetic and environmental factors contribute to the pathogenesis of pancreatitis, and the gut microbiota is a potential source of an environmental effect. In recent years, several new frontiers in gut microbiota and genetic risk assessment research have emerged and improved the understanding of the disease. These investigations showed that the disease progression of pancreatitis could be regulated by the gut microbiome, either through a translocation influence or in a host immune response manner. Meanwhile, the onset of the disease is also associated with the heritage of a pathogenic mutation, and the disease progression could be modified by genetic risk factors. In this review, we focused on the recent advances in the role of gut microbiota in the pathogenesis of pancreatitis, and the genetic susceptibility in pancreatitis.
Keywords: Pancreatitis, Gut microbiota, Genetic susceptibility, Pathogenesis
Pancreatitis, one of the most common gastrointestinal diseases, is the main cause for hospital admission, and the incidence of pancreatitis is increasing worldwide, which is associated with the elevated socioeconomic burden.1 The annual incidence of acute pancreatitis (AP) is approximately 34 per 100,000 in developed countries and it keeps a continuous growth worldwide.2 AP is usually caused by structural obstruction of the biliary tract, alcohol consumption, endoscopic retrograde cholangiopancreatography and drugs, which ultimately lead to acinar cell death, inducing local and systemic inflammation.3-5 Chronic pancreatitis (CP) often occurs in patients with recurrent pancreatic injury or prolonged AP. Despite many advances have been made in respects of the pathophysiology of pancreatitis, there are still no medication available to treat or prevent AP at present.6 Additionally, in many cases, individuals who even have attacks of alcoholism and gallstones do not suffer from AP.7,8 This inclined us to further explore the underlying mechanism of pancreatitis.
The pathogenesis of disease is generally related with genetic and environmental factors, while human gut microbiome is recognized as a potential source of environmental effect on illness.9 Recent studies regarding the role of gut microbiome in the pathophysiology of the pancreas are increasing, during which immune regulation and interplay between host microbiomes and the pancreas attract much attention.10-14 These studies have initiated new insight into pancreatic diseases from the perspective of the gastrointestinal microbiota. On the other hand, it has long been suspected that genetic susceptibility factors conduce to the pathogenesis of the disease, since only a small proportion of alcoholics finally develop CP.15 Various groups of genetic mutations, such as the serine peptidase inhibitor Kazal type 1 (SPINK1), anionic trypsinogen serine protease 2 (PRSS2), cationic trypsinogen serine protease 1 (PRSS1), cystic fibrosis transmembrane conductance regulator (CFTR) genes and so on, were observed in various types of pancreatitis.16,17 These specific genetic mutations instruct us to uncover the underlying mechanism of pancreatitis on a genetic and cellular level.
In this review, we summarize recent advances in research of gut microbiota and genetics related to pancreatitis, and analyze the role of the gut microbiota and genetic susceptibility in the pathogenesis of pancreatitis. Additionally, we discuss the relationship between gut microbiota and genetic susceptibility in patients with pancreatitis and are attempting to speculate the pathogenesis of pancreatitis from a novel perspective.
During the course of AP, microcirculatory injury and hypovolemia would emerge,18 which could cause intestinal mucosal ischemia and subsequent reperfusion injury, leading to dysfunction of intestinal barrier and gut microbiota translocation. Current investigations have shown heterogeneity in intestinal microbial composition between pancreatitis patients and healthy controls. Zhang
Table 1 . Studies about Alterations in Microbiome Composition Involving Pancreatitis Patients.
Disease | Author (year) | Study type | Disease states vs control | Sample type | Microbial evaluation | Microbial alterations |
---|---|---|---|---|---|---|
AP | Zhang | Controlled | AP vs healthy participants | Fecal | 16S rRNA gene sequencing | AP: |
↑Bacteroidetes and Proteobacteria | ||||||
↓Firmicutes and Actinobacteria | ||||||
Li | Controlled | MAP vs SAP | Blood | 16S rDNA gene sequencing | SAP: | |
↑ | ||||||
Yu | Controlled | MAP vs MSAP vs SAP | Fecal | 16S rRNA gene sequencing | MAP: | |
↑Finegoldia ↓Blautia | ||||||
MSAP: | ||||||
↑Anaerococcus ↓ | ||||||
SAP: | ||||||
↑Enterococcus ↓ | ||||||
Hu | Controlled | HTGAP vs AP by other causes | Fecal | 16S rRNA gene sequencing | HTGAP: | |
↑Escherichia/Shigella and Enterococcus | ||||||
↓ | ||||||
CP | Jandhyala | Controlled | CP vs healthy participants | Fecal | 16S rRNA gene sequencing | CP: |
↑ Firmicutes | ||||||
↓ Bacteroidetes | ||||||
Gorovits | Observational | CP vs healthy people from literature reference ranges | Fecal | Bacteriological and gas-liquid chromatography analysis | CP: | |
↑Bifidobacterium and Lactobacillus | ||||||
↓Enterobacter, Proteus, Kleibsella, and Morganella | ||||||
Savitskaia | Observational | CP vs healthy people from literature reference ranges | Fecal | Bacteriological analysis | CP: | |
↑ | ||||||
↓Lactobacillus | ||||||
Hamada | Controlled | CP vs AIP | Fecal | 16S rRNA gene sequencing | CP: | |
↑Bacteroides, Streptococcus, and Clostridium |
AP, acute pancreatitis; CP, chronic pancreatitis; MAP, moderate acute pancreatitis; SAP, severe acute pancreatitis; MSAP, moderate severe acute pancreatitis; HTGAP, hypertriglyceridemia-associated acute pancreatitis; AIP, autoimmune pancreatitis; 16S rRNA, 16S ribosomal ribonucleic acid..
When it comes to the evaluation of severity and prognosis of AP, the imbalance of bacterial composition and altered gut microbiota diversity are two overlooked factors and have been gradually emphasized by researchers in recent years. Yu
Though the efficacy of probiotics, such as
CP with its damaged pancreatic acinar cells, can result in pancreatic exocrine insufficiency and small intestinal bacteria overgrowth. Small intestinal bacteria overgrowth appears to be more likely to occur in CP patients, due to intestinal dysmotility and reduced alkalization of intestinal fluid, as well as reduced pancreas-derived antimicrobial peptide.30 In a meta-analysis performed by Memba
Autoimmune pancreatitis (AIP), a unique form of CP, characterizes by storiform fibrosis and periductal lymphoplasmacytic infiltrate with or without granulocyte epithelial lesions, and depending on which to be divided into two types.37 The most important feature of AIP (solely for type 1) is the elevation of serum immunoglobulin G4. One study found that
It is well-known that gut microbiota takes part in human physiological activities via influences on regulation of the mucosal immune system and intestinal architecture, involvement of digestion and metabolism.39 It is still controversial whether microorganisms inhabit normal pancreas.10,11 But it is a great chance that translocation of intestinal flora would occur, since the pancreas is linked to the gastrointestinal tract anatomically via the pancreatic duct and the route of mesenteric venous and lymphatic drainage (Fig. 1). Gut microbiota is confined to gastrointestinal tract in physiological conditions due to gastrointestinal mucosal barriers, including mechanical barrier, immune barrier, and biological barrier, which can effectively prevent the intestinal pathogenic bacteria and toxins to reach outside the gut. Once this homeostasis is disrupted, intestinal opportunistic pathogens can enter the blood circulation of AP patients through the damaged intestinal barrier, thus aggravating the progression of disease and the occurrence of infectious complications. In a meta-analysis of 18 studies, approximately 59% of patients with pancreatitis had intestinal barrier imbalance.40 Inflammation is the main pathophysiological response in pancreatitis, which is driven by either an infectious or a sterile event. Though bacteria are not the directly cause of pancreatitis, the microorganisms can enter the pancreas in the inflammatory environment and aggravate the local and systemic inflammation. This is consistent with theories that the gut is the origin of clinical sepsis.42,43
In recent years, the role of immune cells in the pathogenesis of pancreatitis has been paid much attention, and further understanding of immune signaling pathway have been utilized to identify new therapeutic targets that may alter disease progression.44,45 The relationship between gut microbiota and host immune system is intimate and complex. Host-microbiota communication is mainly based on one group of host receptors, the pattern recognition receptors (PRRs) of the innate immune system, such as Toll-like receptors, C-type lectin receptors, and nucleotide-binding oligomerization domain (NOD)-like receptors.46-48 In pancreatic acinar cells, inflammation and immune response can be triggered by sensing of microorganism antigens by PRRs, which is involved in the pathogenesis of pancreatitis.39 In animal models, pancreatitis in mice model could be induced by chronic low-dose cerulein (cholecystokinin receptor agonist) stimulation collaborating with NOD1 agonist stimulation, while this effect is prevented in NOD1 knockout mice.49 One study indicated that gut microbiota could trigger non-infectious pancreatic inflammation through NOD1 signaling pathway in pancreatic acinar cells by binding to a peptide derived from peptidoglycan.50
Antimicrobial peptides (AMPs) are secretory components in the gastrointestinal tract. Though most proteins in pancreatic juice are contributed by digestive enzymes, the AMPs secreted by pancreatic acinar cells are also very important component of pancreatic juice.51,52 Pancreatic AMPs have a prominent role in regulating the gut microbiota that is essential for gut innate immunity. There is an intimate bidirectional communication between pancreatic AMPs and gut microbiota. On one hand, the lower gut flora could influence the production of pancreatic AMP to produce an immunoregulatory pancreatic environment by decreasing pro-inflammatory immune cells through short-chain fatty acids which are anti-inflammatory metabolites produced by intestinal microbiome, also facilitate integrity of intestinal epithelium.12 On the other hand, lack of AMP by the pancreas disrupts the gut microbiome homeostasis and leads to intestinal bacteria overgrowth and development of a pro-inflammatory status (Fig. 1). Additionally, the secretion of cathelicidin-related antimicrobial peptide (CRAMP) decreases when the Ca2+ channel Orai1 is knocked out in pancreatic acinar cells (Orai1−/−) of adult mice, and resulted in systemic infection and high mortality rate due to intestinal bacterial overgrowth, elevated intestinal permeability and bacterial translocation.13
Hereditary pancreatitis (HP) is defined as the condition in a family with two or more members suffered from recurrent acute pancreatitis (RAP) or CP in two or more generations, or perhaps pancreatitis which is associated with the pathogenic mutation of the cationic trypsinogen PRSS1 gene.53 This gain-of-function mutation of the cationic trypsinogen gene was first discovered by Whitcomb
Recent HP-related investigations have shown the mechanism and process of a primary susceptibility factor, such as PRSS1 R122H, turn into risk factors for AP and CP via RAP.58-60 These findings confirmed the trypsin dependent theory in which gain-of-function mutations brought about trypsinogen or trypsin to be resistant to degradation. Besides, the activation of premature trypsin might take an alternate path resulting in RAP, thereafter part of the patients subsequently develop to CP. There are some known genetic contributors to familial pancreatitis including loss-of-function mutations of genes which encode the SPINK1, CFTR and variants in other genes.61-65 Whitcomb66 have shown that the gene-environment interactions regarding HP are very complex by using a genome-wide association study analysis performed by next-generation sequencing.
The well-known mechanism of pancreatitis is trypsin premature activation, causing extensive zymogen activation, followed by pancreatic self-digestion, excessive immune response, and subsequent effects.67 Making use of candidate gene approaches, alterations in several distinct genes are associated with the regulation of trypsin in the pancreas, which is correlated with the pathogenesis of pancreatitis. To better understand the role of genetics in pancreatitis, we should firstly focus on the normal pancreas exocrine function, activity and regulation of trypsinogen, a zymogen precursor to trypsin. Trypsin is a protease produced and secreted by pancreatic acinar cells and upstream duct cells and activates other zymogens in the duodenum under a physiological state. Premature activation of trypsin could trigger an excessive, uncontrolled inflammatory response in pancreas, as seen in AP.68 The two most common forms in pancreatic trypsinogen are the cationic (PRSS1) and anionic (PRSS2) forms. In the physiologic condition, autolysis could prevent from premature or excessive trypsin activation in pancreatic acinar and ductal cells. However pathogenic PRSS1 mutations can induce trypsin prematurely activated or degradation-resistant and meanwhile upgrades the level of autoactivation of mutant trypsinogens and trypsin activity within pancreas.8,63,69 As for PRSS2, pathogenic PRSS2 variants were not identified in HP or sporadic CP, whereas a variant in the noncoding region of the
During the inflammatory response of the pancreas, SPINK1 is significantly elevated to prevent excessive activation of trypsinogen and pancreatic damage through feedback inhibition of trypsin. This is the first line of defense against premature activation of intracellular trypsin. The most common p.N34S SPINK1 mutation was first mentioned to be correlated with CP in 2000.71 Although the underlying mechanism of CP remains mystery, a meta-analysis has discovered that the SPINK1 N34S variant could increase the risk of alcoholic, idiopathic, and tropical CP.72 Moreover, it seems to be essential for patients with heterozygous SPINK1 mutations to be linked to RAP or CP in collaborate with additional contributing factors related to recurrent activation of trypsin (like PRSS1 or CFTR).73-75 This suggests that heterozygous SPINK1 mutations could not increase susceptibility of pancreatitis directly, but aggravate recurrent pancreatic injury correlated to the activation of trypsin and promote the progression of CP.
CFTR, an AMP-regulated anion channel located in epithelial cell membranes, mediates the secretion of bicarbonate-rich juice which is vital for secreting pancreatic zymogens. The dysfunction of the
Although the pathogenic role of PRSS1, SPINK1, and CFTR variants in pancreatitis is more widely known, a few uncommon genes also contribute to this process. These genes include calcium-sensing receptor (CASR), chymotrypsin C (CTRC), carboxypeptidase A1 (CPA1), and claudin-2 (CLDN2) gene, which are considered disease modifiers rather than disease initiators (Table 2, Fig. 2).79
Table 2 . Genetic Susceptibility Factors in Pancreatitis.
Genetic risk factors in pancreatitis | First discovered concerned with pancreatitis | Most common pathogenic variant | Mechanism of action | Role in the disease | Phenotype in pancreatitis |
---|---|---|---|---|---|
PRSS1 | Whitcomb | PRSS1 (R122H, N29I, A16V) | Prematurely activated or degradation-resistant | Disease initiator | Hereditary pancreatitis |
Trypsin in acinar cells | |||||
SPINK1 | Witt | SPINK1 (N34S) | Decrease levels of trypsin inhibitor in acinar cells | Disease modifier | Familial pancreatitis |
CFTR | Kerem | CFTR (F508del) | Fail to alkalinize acinar cells, result in retention of zymogens in the duct, and cause ductal obstruction and epithelial damage | - | Hereditary pancreatitis |
Idiopathic pancreatitis | |||||
Recurrent acute pancreatitis | |||||
CTRC | Rosendahl | CTRC (G60G) | Disrupt trypsin inactivation and protective function of CTRC-mediated trypsinogen degradation | Disease modifier | Recurrent acute pancreatitis |
Chronic pancreatitis | |||||
CASR | Felderbauer | CASR (R990G) | Lost control of pancreatic juice calcium concentration and increases risk of trypsinogen activation and stabilization of trypsin | Disease modifier | Chronic pancreatitis |
Multigenic variants: | - | - | - | - | Recurrent acute pancreatitis |
CFTR/SPINK1; CTRC/SPINK1; CASR/SPINK1 | Chronic pancreatitis |
PRSS1, serine protease 1; SPINK1, serine peptidase inhibitor Kazal type 1; CFTR, cystic fibrosis transmembrane conductance regulator; CTRC, chymotrypsin C; CASR, calcium-sensing receptor..
Although genetic etiology accounts for around 25% of all cases of CP, it should be highlighted that about 40% of cases are thought to be idiopathic.80 The most common etiology of pancreatitis is still biliary disease, hypertriglyceridemia (HTG) and alcoholism.81 There have not been observed that genetic factors are involved in bile duct obstruction, pancreatic divisum, or the dysfunction of Oddi sphincter. The emergence of alcohol-related CP is often clustered in families, and this would further indicate a genetic predisposition.82 Epidemiological studies have unexpectedly found that only a small ratio of heavy drinkers (less than 3%) would develop CP, but the risk of alcoholic pancreatitis is low when smoking is adjusted in regression analysis.7,83 Moreover, a threshold of more than five drinks a day (1 drink=4 g of alcohol) or 35 drinks a week must be achieved before the risk of pancreatitis significantly increase.84 These observations suggest that alcohol consumption is stronger modifier factor than a susceptibility factor, especially with smoking83 and CLDN risk variants.66 The CLDN2 gene, encoding claudin-2, is expressed at low levels in pancreatic ducts as a tight junction protein. This high-risk gene variant triggers alcohol-related CP in men whose probability are greater compared with women with a high-risk locus near CLDN2 on the X chromosome correlated to pancreatitis.66,85,86 Further mechanisms of action of this risk locus need to be clarified.
Like alcohol-induced CP, only a small ratio of patients with HTG develop pancreatitis, which has inclined us to investigate genetic susceptibility factors.87 HTG-induced pancreatitis attacks typically from one or more secondary causes, such as medications, diabetes, alcoholism, pregnancy, in patients with potentially common genetic abnormalities of lipoprotein metabolism. Common variants in genes such as APOA5 (encoding apo A5), GCKR (encoding glucokinase regulatory protein), LPL (encoding lipoprotein lipase) and APOB (encoding apo B), associated with lipoprotein metabolism, can lead to a rise in serum triglyceridemia to the extent of incurring pancreatitis.88 A detailed process of triglyceridemia metabolism can refer to elsewhere (see review).89 Focused on genetic factors to HTG pancreatitis, Chang
The causation between microbiota and host genetics remains to be elucidated, since our knowledge of the host side is limited and recognition of which bacterial genes are implementing the crosstalk with the host is poorer.95 What we have already known is that the gut microbiota diversity, structure, and composition are associated with host genetic variations.96,97 These associations are specifically motivated by host genetic variation in immunity-related pathways.98 Meanwhile, one report demonstrates that genetic risk for developing type 1 diabetes autoimmunity is linked with significant changes in the gut microbiota,99 which is a manifestation of interaction between gut microbiota and host genetic factors in pancreas disorders. As for pancreatitis, another study reported that children with CP who carry different genetic variations concerned with abnormal activation of trypsinogen and secretions in the pancreatic duct present different abundances of gut microbiota genera.100 Their findings support that disordered gut microbiota may affect host gene expression and then disturbing normal physiology function and contributing to the development of disease. On basis of above evidence, we can raise the hypothesis that the pathogenesis of pancreatitis might be influenced by the interactions of both genetic and microbial factors. However, the in-depth mechanism needs to be further investigated.
Growing evidence regarding the role of gut microbiota and genetic variations in pathophysiologic mechanism of pancreatitis has provided us with new insights into AP and CP. We now know that pancreatitis is not only a dysfunction of acinar cells, but a multi-factorial complicated pancreatic disorder involving gut microbiota, host immune system, environmental factors, and genetic causes. Although mechanistic understanding of these two rare factors is limited, it is clear that continued advances in bacteria-related function and genomic technologies would act as novel therapeutic interventions for pancreatitis in the near future.
This work was supported by the National Natural Science Foundation of China (number: 81700483), Chongqing Research Program of Basic Research and Frontier Technology (numbers: cstc2017jcyjAX0302, cstc2020jcyj-msxmX1100), Frontier Technology Research Program of Army Medical University (number: 2019XLC3051).
No potential conflict of interest relevant to this article was reported.
Table 1 Studies about Alterations in Microbiome Composition Involving Pancreatitis Patients
Disease | Author (year) | Study type | Disease states vs control | Sample type | Microbial evaluation | Microbial alterations |
---|---|---|---|---|---|---|
AP | Zhang | Controlled | AP vs healthy participants | Fecal | 16S rRNA gene sequencing | AP: |
↑Bacteroidetes and Proteobacteria | ||||||
↓Firmicutes and Actinobacteria | ||||||
Li | Controlled | MAP vs SAP | Blood | 16S rDNA gene sequencing | SAP: | |
↑ | ||||||
Yu | Controlled | MAP vs MSAP vs SAP | Fecal | 16S rRNA gene sequencing | MAP: | |
↑Finegoldia ↓Blautia | ||||||
MSAP: | ||||||
↑Anaerococcus ↓ | ||||||
SAP: | ||||||
↑Enterococcus ↓ | ||||||
Hu | Controlled | HTGAP vs AP by other causes | Fecal | 16S rRNA gene sequencing | HTGAP: | |
↑Escherichia/Shigella and Enterococcus | ||||||
↓ | ||||||
CP | Jandhyala | Controlled | CP vs healthy participants | Fecal | 16S rRNA gene sequencing | CP: |
↑ Firmicutes | ||||||
↓ Bacteroidetes | ||||||
Gorovits | Observational | CP vs healthy people from literature reference ranges | Fecal | Bacteriological and gas-liquid chromatography analysis | CP: | |
↑Bifidobacterium and Lactobacillus | ||||||
↓Enterobacter, Proteus, Kleibsella, and Morganella | ||||||
Savitskaia | Observational | CP vs healthy people from literature reference ranges | Fecal | Bacteriological analysis | CP: | |
↑ | ||||||
↓Lactobacillus | ||||||
Hamada | Controlled | CP vs AIP | Fecal | 16S rRNA gene sequencing | CP: | |
↑Bacteroides, Streptococcus, and Clostridium |
AP, acute pancreatitis; CP, chronic pancreatitis; MAP, moderate acute pancreatitis; SAP, severe acute pancreatitis; MSAP, moderate severe acute pancreatitis; HTGAP, hypertriglyceridemia-associated acute pancreatitis; AIP, autoimmune pancreatitis; 16S rRNA, 16S ribosomal ribonucleic acid.
Table 2 Genetic Susceptibility Factors in Pancreatitis
Genetic risk factors in pancreatitis | First discovered concerned with pancreatitis | Most common pathogenic variant | Mechanism of action | Role in the disease | Phenotype in pancreatitis |
---|---|---|---|---|---|
PRSS1 | Whitcomb | PRSS1 (R122H, N29I, A16V) | Prematurely activated or degradation-resistant | Disease initiator | Hereditary pancreatitis |
Trypsin in acinar cells | |||||
SPINK1 | Witt | SPINK1 (N34S) | Decrease levels of trypsin inhibitor in acinar cells | Disease modifier | Familial pancreatitis |
CFTR | Kerem | CFTR (F508del) | Fail to alkalinize acinar cells, result in retention of zymogens in the duct, and cause ductal obstruction and epithelial damage | - | Hereditary pancreatitis |
Idiopathic pancreatitis | |||||
Recurrent acute pancreatitis | |||||
CTRC | Rosendahl | CTRC (G60G) | Disrupt trypsin inactivation and protective function of CTRC-mediated trypsinogen degradation | Disease modifier | Recurrent acute pancreatitis |
Chronic pancreatitis | |||||
CASR | Felderbauer | CASR (R990G) | Lost control of pancreatic juice calcium concentration and increases risk of trypsinogen activation and stabilization of trypsin | Disease modifier | Chronic pancreatitis |
Multigenic variants: | - | - | - | - | Recurrent acute pancreatitis |
CFTR/SPINK1; CTRC/SPINK1; CASR/SPINK1 | Chronic pancreatitis |
PRSS1, serine protease 1; SPINK1, serine peptidase inhibitor Kazal type 1; CFTR, cystic fibrosis transmembrane conductance regulator; CTRC, chymotrypsin C; CASR, calcium-sensing receptor.